CDS
| Accession Number | TCMCG057C36793 |
| gbkey | CDS |
| Protein Id | XP_018442058.1 |
| Location | complement(join(47428009..47428077,47428180..47429393,47429521..47429753,47429882..47430031,47430103..47430223,47430435..47430561)) |
| Gene | LOC108813875 |
| GeneID | 108813875 |
| Organism | Raphanus sativus |
Protein
| Length | 637aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018586556.1 |
| Definition | PREDICTED: protein FRIGIDA-ESSENTIAL 1 isoform X1 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | S |
| Description | Zinc finger CCCH domain-containing protein |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE | - |
| KEGG_ko | - |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0008150
[VIEW IN EMBL-EBI] GO:0010219 [VIEW IN EMBL-EBI] GO:0010220 [VIEW IN EMBL-EBI] GO:0048518 [VIEW IN EMBL-EBI] GO:0048583 [VIEW IN EMBL-EBI] GO:0048584 [VIEW IN EMBL-EBI] GO:0050789 [VIEW IN EMBL-EBI] GO:0065007 [VIEW IN EMBL-EBI] GO:0080134 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGTCTGATTCCGATATGGACATTGACGACGACGAGGTCCAACAAGTAAACGTACAACCCCCCACAGTTGCTGGAGAATCTCGATTGCTTGCTGCTAGACCAATCGAAGCTTCCGATTCCCAGAACGATGTGAAGAAGCATTCAGTTGAGCAATCAAAGATCATAAACGGAAACTTACTACCTACTCTTTCTGAGAATAGTGGGAAGAATCTATTTCTGGAAGGTGAAAAAGGCTTAATTTTACCAAGTCTCAGGTTTCCTGCTCCGGCACATAGCTTTCCTTTGGCGAATGGACCAGAACAATCAAAGATCATAAACGGAAACTTACAACCTAATCTTACTGGGAGTAGTGGGAAGAAACTTATGCTGGAAGGGGAAAAAGACACAGTTTTATCAAGGTTTCCTGCTCCGGTGCAGAGCTTTCCGCCGGCGAATGGACCAGAACAAAAACGTCAAGCGTTTCCCTGCAAGTTCTTTCCCCAAGGGCGGTGTACCAAAGGGAACTCCTGCAGGTTTCTTCATGTGAACGAGAATATGAATCGCACTAGTCAGCAACAAGCGGTGAATCATACTAGTCAGCTACAAGCGGTGAATCATATGGCTGGAACCAGTGGTATTAAGTCTGGTGAAGAAAGAAGACCGTTTGAGAACATAGAAGGTGTACGATTCCCCATGTTAAGCACAAATGGCATCACATCTTTGGTGAATCCCGGGAATCCTCCTGCTGGTCAGAGAGTTTTCCCTTTCACGAACGAGATGCGCTTTATGCCTTCATTGGAAAACATGGGAAGAGGGAGTCTACAAAAATGTGGTGCTGTGTTCACTGAGAACAGGCCTGTATTTGATAATAGAATTAGTTCCTTCCCATTGAGAAGCAGCTTTGTTCAAGAACATGGATCTCTTATCACTTCTAATAGACCAACAGACATGGGATCTTCCGGACCAGCGTGGACAGGATCCGTCTTCAGTTCTGCTCCTCTGAATCAGTATGATTCCCCCTTTGGGAATTTTGAAAACAGGAACGATATAAATGGATCTGGATCACTACCAGTGGAGCAAGCGATATCTGTTTCCTCAGTTCAAGATGCAGAAGTCGACACGACTAGCAACAAAAAGGAAGTTTCTTCAAATGATTGGGAACCTTCTGAACCTTTTCGGCCATCTTTCACAATTCCTCCTTATATACTTCCCTCGTCTGATGCCCTCTACGATCCTTTCACGGATATAGATAATCCAGAAGACAAATCTCTTAATGCTCCATCGTCAAGTAAAGGGAAAGATGCACAGAAAGAGTCCGGCCAGCAGAAAGATGGTGATTCTGCTAGTAATGATAAAAACAGTTCATGCAGCCAAAATCAATTCCAAGAAACTGTGGCGAGGACAAATTTGGAAGCACATGTAGCAGTGGAAGGAGTGGCTACTTCGGTGGTTGATCAAAATGATGCAACAACACCAAGCAAAGAGGTATCTTCATCGGCGGCTGTTGAGAATAGAGTTGTCTTGAAAAGAAGCAAACCTGCAGGGCATGGATCTTGGCATAGAAGTGATGGGTCATCACATCAAAAGATGTTGAAAACAGATGAGATGGATGGGGAAGTGAGGTCGGACGCAGGAACAAAAGTAATGAGACAATTCAGGACAGCAGTTGTGGAAAACATTAAAGAAATGTTGAAACCCTTGTGGCGTGAAGGCCGTCTTAGCAAAGACGTGCATAACATGATAGTTAAAAGAGCTACTGAAAAGATAGTCAGTGCTGCTGTCCAGTTACATCAGGTGCCGACTAACAACGAATCAGTCGAGAAATACCTTAGTACGTCTGCAACTAGAATGGTGAAACTGGTAGAGGGGTACGTCGAAAAGTATGGTAAACCCCGTCCTAAAGCCTCAGGTATCATCAAATCAAATGCCAGTTAA |
| Protein: MSDSDMDIDDDEVQQVNVQPPTVAGESRLLAARPIEASDSQNDVKKHSVEQSKIINGNLLPTLSENSGKNLFLEGEKGLILPSLRFPAPAHSFPLANGPEQSKIINGNLQPNLTGSSGKKLMLEGEKDTVLSRFPAPVQSFPPANGPEQKRQAFPCKFFPQGRCTKGNSCRFLHVNENMNRTSQQQAVNHTSQLQAVNHMAGTSGIKSGEERRPFENIEGVRFPMLSTNGITSLVNPGNPPAGQRVFPFTNEMRFMPSLENMGRGSLQKCGAVFTENRPVFDNRISSFPLRSSFVQEHGSLITSNRPTDMGSSGPAWTGSVFSSAPLNQYDSPFGNFENRNDINGSGSLPVEQAISVSSVQDAEVDTTSNKKEVSSNDWEPSEPFRPSFTIPPYILPSSDALYDPFTDIDNPEDKSLNAPSSSKGKDAQKESGQQKDGDSASNDKNSSCSQNQFQETVARTNLEAHVAVEGVATSVVDQNDATTPSKEVSSSAAVENRVVLKRSKPAGHGSWHRSDGSSHQKMLKTDEMDGEVRSDAGTKVMRQFRTAVVENIKEMLKPLWREGRLSKDVHNMIVKRATEKIVSAAVQLHQVPTNNESVEKYLSTSATRMVKLVEGYVEKYGKPRPKASGIIKSNAS |